User:IB1usea/Books/IT for bioinformatics
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IT for bioinformatics
Web Servers and Application
- .NET Bio
- 2D gel analysis software
- Abalone (molecular mechanics)
- Affymetrix GeneChip Operating Software
- Afroinsectiphilia
- Align-m
- Alignment-free sequence analysis
- AliView
- AlleleID
- Alloenzyme
- AMAP
- AMPHORA
- Anduril (workflow engine)
- ANGIS
- Animalia Paradoxa
- ARB Project
- Archaeopteryx (evolutionary tree visualization and analysis)
- ARKive
- Arlequin
- ArrayTrack
- Articulata hypothesis
- AstridBio
- Autapomorphy
- BAli-Phy
- BALL
- Basal (phylogenetics)
- Bayesian inference in phylogeny
- Beacon designer
- Behavior mutation
- Bellerophon program
- BioBIKE
- Bioconductor
- BioExtract
- Bioinformatic Harvester
- Bioinformatics workflow management system
- BioJava
- BioJS
- Biological classification
- BioNumerics
- BioPerl
- BioPHP
- Biopython
- BioRuby
- BioSLAX
- Biskit
- BLAST
- Blast2GO
- BLAT (bioinformatics)
- BLOSUM
- BNAber
- Bowtie (sequence analysis)
- Broadly neutralizing HIV-1 antibodies
- Caminalcules
- Catalogue of Life
- Cetancodontamorpha
- Cetruminantia
- Chemotaxonomy
- CheShift
- Chronospecies
- Circumscriptional name
- Clade
- Cladistics
- Cladistics (journal)
- Cladogenesis
- Cladogram
- Cline (biology)
- Clone manager
- Clustal
- Cn3D
- Compositional domain
- Computational phylogenetics
- Computational Resource for Drug Discovery
- Conserved name
- Conserved sequence
- Coot (software)
- Covarion
- Crown eukaryotes
- Crown group
- CS-BLAST
- Cytoscape
- DAVID (bioinformatics tool)
- David Hillis
- Debian-Med
- Dendroscope
- DIALIGN-T
- DIALIGN-TX
- Disk-covering method
- Distance matrices in phylogeny
- DNASTAR
- ECRbase
- EggNOG (database)
- Elvis taxon
- EMovie
- Empire (program)
- Encyclopedia of Life
- Eocyte hypothesis
- ETBLAST
- Eurasian Adam
- Evolutionary neuroscience
- Evolutionary taxonomy
- External transcribed spacer
- FASTA
- FastPCR
- FlyExpress
- Foldit
- FoldX
- Form classification
- Formatdb
- Galaxy (computational biology)
- Gap penalty
- GC-content
- Gene Designer
- Gene family
- GeneMark
- GenePattern
- Generalized tree alignment
- Generic Model Organism Database
- GENESIS (software)
- Genetic distance
- Genetic history of Europe
- Genevestigator
- GenGIS
- GenMAPP
- GenoCAD
- Genome diversity and karyotype evolution of mammals
- Genomespace
- Genomic signature
- GENSCAN
- GENtle
- GESS
- Geworkbench
- Ghost lineage
- Handel (bioinformatics software package)
- Haplogroup
- Haplogroup A-L1085
- Harvestman phylogeny
- HH-suite
- HHpred / HHsearch
- High-performance Integrated Virtual Environment
- HMMER
- Homology (biology)
- Human mitochondrial molecular clock
- HYPHY (software)
- I-TASSER
- Ichnotaxon
- IMOD (software)
- Implied weighting
- Indigenous (ecology)
- Informative site
- Infraspecific name
- Integrated Genome Browser
- Integromics
- Internal transcribed spacer
- IsoBase
- Isochore (genetics)
- Jacques Gauthier
- JAligner
- Jalview
- Jmol
- Joseph Felsenstein
- Jpred
- Kepler scientific workflow system
- Kew Rule
- Klee diagram
- LabKey Server
- Last universal ancestor
- Lazarus taxon
- Least squares inference in phylogeny
- Lineage (evolution)
- List of alignment visualization software
- List of biomedical cybernetics software
- List of disorder prediction software
- List of gene families
- List of gene prediction software
- List of molecular graphics systems
- List of open-source bioinformatics software
- List of phylogenetic tree visualization software
- List of phylogenetics software
- List of protein structure prediction software
- List of RNA structure prediction software
- List of sequence alignment software
- List of systems biology visualization software
- List of Y-DNA single-nucleotide polymorphisms
- Long branch attraction
- Macroscopic Observatory
- MAFFT
- Mascot (software)
- Mass spectrometry data format
- MassWiz
- MAVID
- Maximum clade credibility tree
- Maximum parsimony (phylogenetics)
- McDonald–Kreitman test
- Median graph
- MEGA, Molecular Evolutionary Genetics Analysis
- Mega2, the Manipulation Environment for Genetic Analysis
- MEGAN
- Microbial phylogenetics
- Mitochondrial Eve
- MochiView
- MODELLER
- Models of DNA evolution
- Molecular clock
- Molecular phylogenetics
- Molecular Phylogenetics and Evolution
- MolIDE
- Monophyly
- Morphobank
- Most recent common ancestor
- Multiple sequence alignment
- MUMmer
- MUSCLE (alignment software)
- NAPP (Database)
- Needleman–Wunsch algorithm
- Neighbor joining
- Neighbor-net
- Neomura
- NoeClone
- Nomen novum
- Non-cellular life
- OLIGO Primer Analysis Software
- Omixon
- OpenChrom
- OpenMS
- OrthoDB
- Orthologous MAtrix
- Outgroup (cladistics)
- PANDIT (database)
- Paraphyly
- ParaSurf
- Pathovar
- PathVisio
- PatternHunter
- PAUP
- PDBREPORT
- Peramorphosis
- Perfect phylogeny
- Phenetics
- PhEVER
- Phred base calling
- PHYLIP
- Phylogenetic bracketing
- Phylogenetic comparative methods
- Phylogenetic footprinting
- Phylogenetic network
- Phylogenetic nomenclature
- Phylogenetic tree
- Phylogenetics
- Phylogeny (psychoanalysis)
- PhylomeDB
- Phyloscan
- PhyloXML
- Phyre / Phyre2
- Pipeline Pilot
- PLINK (genetic tool-set)
- Polyphenism
- Polyphyly
- Polytomy
- Primer Premier
- PrimerPlex
- ProbCons
- Protein subcellular localization prediction
- Proteomics Standards Initiative
- ProteoWizard
- Protomap (proteomics)
- PSI Protein Classifier
- PSIPRED
- PSORT
- PupaSuite
- Qlucore
- Quantitative comparative linguistics
- Quartet distance
- Quasi-median networks
- Quinarian system
- QuteMol
- RAPTOR (software)
- RaptorX / software for protein modeling and analysis
- RasMol
- RedToL
- Retrotransposon marker
- RNA integrity number
- Robinson–Foulds metric
- Rosalind (education platform)
- SAMtools
- SAR supergroup
- Saturation (genetic)
- Scigress
- Semantides
- Sequence alignment
- SEQUEST
- Serotype
- ShelXle
- Short Oligonucleotide Analysis Package
- Sim4
- Simbiosys
- Similarity matrix
- Single-access key
- Sirius visualization software
- Sister group
- Smith–Waterman algorithm
- Snagger
- Soaplab
- Soft-bodied organism
- Software for protein model error verification
- Software for protein structure visualization
- SPAdes (software)
- Species name
- Split (phylogenetics)
- Split networks
- SplitsTree
- Stemloc
- Stemmatics
- STING
- Stratocladistics
- Structural alignment software
- Substitution model
- Superorganism
- Supertree
- Svenska Spindlar
- Symplesiomorphy
- Synapomorphy
- Systema Naturae
- Systematics
- T-Coffee
- T-REX (webserver)
- TaveRNA
- Taverna workbench
- Taxon
- Taxon in disguise
- Taxonomy (biology)
- The Genomic HyperBrowser
- The Proteolysis Map
- Three-domain system
- Three-taxon analysis
- TimeLogic
- TimeTree
- TopFIND
- Torsion (gastropod)
- Toxicofera
- Trace fossil classification
- Trans-Proteomic Pipeline
- Transformed cladistics
- Transitional fossil
- Tree alignment
- Tree of Life Web Project
- Tree rearrangement
- TreeFam
- Treefinder
- Ubuntu-Med
- UCbase
- UCSF Chimera
- UGENE
- UPGMA
- UTOPIA (Bioinformatics tools)
- Vector NTI
- Velvet assembler
- Viral phylodynamics
- Virus classification
- Web-based taxonomy
- Webtag (software)
- WHAT IF software
- Wikispecies
- Woeseian revolution
- Xrate
- Y Chromosome Consortium
- Yass (software)
- Zombie taxon